[xrekcor]

Have you setup a mastering track with mastering plugs active that is running to your monitor outputs? I usually get latency issues when recording like this... if so setup a monitoring track and sends all your subs there you can swap between the two as required....

The other thing I have tried is “save as” your session then commit all the relevant tracks this works well where you have a lot of plugs active. You can then keep the committed ver and/or import the new tracks back to the original session. I have another session where a have this sync issue where first run through I have a clip out of sync yet it is where it should be but the sync issues goes after a second or third run through.... that one is even weirder to try and figure out.